STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc61Coiled-coil domain containing 61. (515 aa)    
Predicted Functional Partners:
LOC100702181
Peptide YYa.
    
 0.753
npy
Neuropeptide Y.
   
 0.515
LOC100698807
Prepronociceptin a.
    
  0.486
pomc
Uncharacterized protein.
    
 0.473
LOC100708840
Proopiomelanocortin.
    
 0.473
penk
Proenkephalin a.
    
 0.457
SST
Somatostatin.
    
 0.453
LOC100698517
Prodynorphin.
     
 0.452
LOC100712192
Melanin-concentrating hormone receptor 2; Belongs to the G-protein coupled receptor 1 family.
     
 0.435
fopnl
LisH domain-containing protein FOPNL isoform X2.
      
 0.430
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.