Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100692000Ig-like domain-containing protein. (206 aa)    
Predicted Functional Partners:
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
     
 0.915
LOC100709183
Uncharacterized protein.
     
  0.914
ENSONIP00000036669
annotation not available
     
  0.885
rps14
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
     
 0.831
ENSONIP00000068140
annotation not available
     
  0.812
espl1
Extra spindle pole bodies like 1, separase.
   
 
 0.690
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.645
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.645
Ndc80
NDC80 kinetochore complex component.
   
  
 0.615
ENSONIP00000036250
annotation not available
     
  0.614
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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