Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC102082014Raftlin, lipid raft linker 1a. (697 aa)    
Predicted Functional Partners:
LOC100690104
RasGEF domain family, member 1Bb.
      
 0.464
czib
UPF0587 protein C1orf123 homolog.
      
 0.442
ndnf
Neuron-derived neurotrophic factor.
      
 0.429
GALNT15
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.427
scube1
Signal peptide, CUB domain, EGF-like 1.
      
 0.419
ptpra
Receptor-type tyrosine-protein phosphatase alpha.
      
 0.414
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.410
mal2
Mal, T cell differentiation protein 2 (gene/pseudogene).
      
 0.409
rassf3
Ras association domain family member 3.
      
 0.409
ENSONIP00000050907
E3 ubiquitin/ISG15 ligase TRIM25-like isoform X3.
  
     0.407
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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