Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
LOC100707023Tax1 (human T-cell leukemia virus type I) binding protein 1a. (1437 aa)    
Predicted Functional Partners:
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
   
 0.924
ENSONIP00000047919
Ubiquitin B.
    
  0.847
rb1cc1
RB1-inducible coiled-coil 1.
    
 
 0.815
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.795
tbk1
TANK-binding kinase 1.
    
 0.795
optn
Optineurin.
    
 0.783
azi2
5-azacytidine induced 2.
    
 
 0.776
LOC100691403
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
    
 0.774
sqstm1
Sequestosome 1.
   
 0.770
mtpap
Mitochondrial poly(A) polymerase.
    
   0.759
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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