STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100707023Tax1 (human T-cell leukemia virus type I) binding protein 1a. (1437 aa)    
Predicted Functional Partners:
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.935
gabarap
Gamma-aminobutyric acid receptor-associated protein.
   
 0.935
LOC100691403
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
  
 
0.926
LOC100697001
Gamma-aminobutyric acid receptor-associated protein-like 1.
   
  0.918
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
   
 0.873
rb1cc1
RB1-inducible coiled-coil 1.
    
 
 0.864
azi2
5-azacytidine induced 2.
    
 
 0.774
lgals8
Galectin.
    
 
 0.675
LOC100696357
Galectin.
    
 
 0.675
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.588
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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