Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100696891Solute carrier family 46 member 3. (478 aa)    
Predicted Functional Partners:
LOC100711605
Malate synthase-like.
     
 0.667
ints1
Integrator complex subunit 1.
    
 0.448
ints9
Integrator complex subunit 9.
    
 0.436
ints11
Integrator complex subunit 11.
    
 0.433
ints13
Integrator complex subunit 13.
    
 0.411
slc25a32
Solute carrier family 25 member 32b; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.410
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.410
ints4
Integrator complex subunit 4.
    
 0.405
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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