Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC100704898RAR-related orphan receptor C a. (474 aa)    
Predicted Functional Partners:
LOC100711812
Aryl hydrocarbon receptor nuclear translocator-like 2.
    
 0.690
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
    
 0.690
I3J2C4_ORENI
Sidoreflexin.
      
 0.651
I3KB63_ORENI
Link domain-containing protein.
      
 0.640
arntl
Aryl hydrocarbon receptor nuclear translocator-like 1a.
    
 0.626
ncor2
Nuclear receptor corepressor 2.
    
  0.602
ncor1
Nuclear receptor corepressor 1.
    
  0.602
nrip1
Nuclear receptor interacting protein 1b.
    
 0.587
I3JJ43_ORENI
D site albumin promoter binding protein a.
    
 0.529
LOC100698155
D site albumin promoter binding protein b.
    
 0.529
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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