scaf4 protein (Oreochromis niloticus) - STRING interaction network

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Predicted Interactions

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Score

scaf4

SR-related CTD-associated factor 4a. (1151 aa)

Predicted Functional Partners:

polr2a

0.932

rnmt

0.884

NCBP1

0.860

Pcf11

0.780

polr2b

0.761

exosc10

0.751

Xrn2

0.700

tent4b

0.680

I3JJE8_ORENI

0.680

tent4a

0.680

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I3JJE8_ORENI	exosc10	ENSONIP00000008992	ENSONIP00000002901	Terminal nucleotidyltransferase 4A.	Exosome component 10.	0.726
I3JJE8_ORENI	scaf4	ENSONIP00000008992	ENSONIP00000005904	Terminal nucleotidyltransferase 4A.	SR-related CTD-associated factor 4a.	0.680
NCBP1	Pcf11	ENSONIP00000058989	ENSONIP00000045236	Nuclear cap binding protein subunit 1.	PCF11 cleavage and polyadenylation factor subunit.	0.848
NCBP1	Xrn2	ENSONIP00000058989	ENSONIP00000023567	Nuclear cap binding protein subunit 1.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.609
NCBP1	exosc10	ENSONIP00000058989	ENSONIP00000002901	Nuclear cap binding protein subunit 1.	Exosome component 10.	0.595
NCBP1	polr2a	ENSONIP00000058989	ENSONIP00000070707	Nuclear cap binding protein subunit 1.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.727
NCBP1	polr2b	ENSONIP00000058989	ENSONIP00000000084	Nuclear cap binding protein subunit 1.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.757
NCBP1	rnmt	ENSONIP00000058989	ENSONIP00000019278	Nuclear cap binding protein subunit 1.	mRNA cap guanine-N7 methyltransferase.	0.776
NCBP1	scaf4	ENSONIP00000058989	ENSONIP00000005904	Nuclear cap binding protein subunit 1.	SR-related CTD-associated factor 4a.	0.860
Pcf11	NCBP1	ENSONIP00000045236	ENSONIP00000058989	PCF11 cleavage and polyadenylation factor subunit.	Nuclear cap binding protein subunit 1.	0.848
Pcf11	Xrn2	ENSONIP00000045236	ENSONIP00000023567	PCF11 cleavage and polyadenylation factor subunit.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.699
Pcf11	exosc10	ENSONIP00000045236	ENSONIP00000002901	PCF11 cleavage and polyadenylation factor subunit.	Exosome component 10.	0.456
Pcf11	polr2a	ENSONIP00000045236	ENSONIP00000070707	PCF11 cleavage and polyadenylation factor subunit.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.960
Pcf11	polr2b	ENSONIP00000045236	ENSONIP00000000084	PCF11 cleavage and polyadenylation factor subunit.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.841
Pcf11	scaf4	ENSONIP00000045236	ENSONIP00000005904	PCF11 cleavage and polyadenylation factor subunit.	SR-related CTD-associated factor 4a.	0.780
Xrn2	NCBP1	ENSONIP00000023567	ENSONIP00000058989	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	Nuclear cap binding protein subunit 1.	0.609
Xrn2	Pcf11	ENSONIP00000023567	ENSONIP00000045236	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	PCF11 cleavage and polyadenylation factor subunit.	0.699
Xrn2	exosc10	ENSONIP00000023567	ENSONIP00000002901	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	Exosome component 10.	0.727
Xrn2	polr2a	ENSONIP00000023567	ENSONIP00000070707	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.657
Xrn2	rnmt	ENSONIP00000023567	ENSONIP00000019278	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	mRNA cap guanine-N7 methyltransferase.	0.499