scaf4 protein (Oreochromis niloticus) - STRING interaction network

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[Homology]

Score

scaf4

SR-related CTD-associated factor 4a. (1151 aa)

Predicted Functional Partners:

polr2a

0.944

exosc10

0.928

I3K1J6_ORENI

0.886

NCBP1

0.880

I3JHG0_ORENI

0.880

Pcf11

0.860

mtrex

0.855

polr2b

0.833

polr2c

0.831

Xrn2

0.830

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I3JHG0_ORENI	Xrn2	ENSONIP00000059006	ENSONIP00000023567	Drosha ribonuclease III.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.647
I3JHG0_ORENI	exosc10	ENSONIP00000059006	ENSONIP00000002901	Drosha ribonuclease III.	Exosome component 10.	0.638
I3JHG0_ORENI	mtrex	ENSONIP00000059006	ENSONIP00000009566	Drosha ribonuclease III.	Mtr4 exosome RNA helicase.	0.401
I3JHG0_ORENI	polr2c	ENSONIP00000059006	ENSONIP00000030110	Drosha ribonuclease III.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.524
I3JHG0_ORENI	scaf4	ENSONIP00000059006	ENSONIP00000005904	Drosha ribonuclease III.	SR-related CTD-associated factor 4a.	0.880
I3K1J6_ORENI	scaf4	ENSONIP00000014991	ENSONIP00000005904	Uncharacterized protein.	SR-related CTD-associated factor 4a.	0.886
NCBP1	Pcf11	ENSONIP00000058989	ENSONIP00000045236	Nuclear cap binding protein subunit 1.	PCF11 cleavage and polyadenylation factor subunit.	0.925
NCBP1	Xrn2	ENSONIP00000058989	ENSONIP00000023567	Nuclear cap binding protein subunit 1.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.611
NCBP1	exosc10	ENSONIP00000058989	ENSONIP00000002901	Nuclear cap binding protein subunit 1.	Exosome component 10.	0.830
NCBP1	mtrex	ENSONIP00000058989	ENSONIP00000009566	Nuclear cap binding protein subunit 1.	Mtr4 exosome RNA helicase.	0.977
NCBP1	polr2a	ENSONIP00000058989	ENSONIP00000070707	Nuclear cap binding protein subunit 1.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.770
NCBP1	polr2b	ENSONIP00000058989	ENSONIP00000000084	Nuclear cap binding protein subunit 1.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.891
NCBP1	polr2c	ENSONIP00000058989	ENSONIP00000030110	Nuclear cap binding protein subunit 1.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.734
NCBP1	scaf4	ENSONIP00000058989	ENSONIP00000005904	Nuclear cap binding protein subunit 1.	SR-related CTD-associated factor 4a.	0.880
Pcf11	NCBP1	ENSONIP00000045236	ENSONIP00000058989	PCF11 cleavage and polyadenylation factor subunit.	Nuclear cap binding protein subunit 1.	0.925
Pcf11	Xrn2	ENSONIP00000045236	ENSONIP00000023567	PCF11 cleavage and polyadenylation factor subunit.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.643
Pcf11	exosc10	ENSONIP00000045236	ENSONIP00000002901	PCF11 cleavage and polyadenylation factor subunit.	Exosome component 10.	0.445
Pcf11	polr2a	ENSONIP00000045236	ENSONIP00000070707	PCF11 cleavage and polyadenylation factor subunit.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.980
Pcf11	polr2b	ENSONIP00000045236	ENSONIP00000000084	PCF11 cleavage and polyadenylation factor subunit.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.839
Pcf11	polr2c	ENSONIP00000045236	ENSONIP00000030110	PCF11 cleavage and polyadenylation factor subunit.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.840