STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
edem3alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (901 aa)    
Predicted Functional Partners:
mogs
Mannosyl-oligosaccharide glucosidase.
    
 
 0.593
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
 0.574
tcf19
Transcription factor 19.
      
 0.528
LOC100711348
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B.
      
 0.492
Shtn1
Shootin 1.
      
 0.468
dnajc3
DnaJ (Hsp40) homolog, subfamily C, member 3a.
    
 
 0.460
txndc11
Thioredoxin domain containing 11.
    
 
 0.458
Man2a2
Alpha-mannosidase.
    
 
 0.441
rpn1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]
    
 
 0.432
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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