Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
vps36Vacuolar protein sorting 36 homolog. (382 aa)    
Predicted Functional Partners:
snf8
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.999
vps25
Vacuolar protein-sorting-associated protein 25.
   
 0.999
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
 0.997
vps37a
VPS37A subunit of ESCRT-I.
    
 0.992
LOC100701199
Charged multivesicular body protein 6a.
 
  
 0.986
LOC100705156
Charged multivesicular body protein 6.
 
  
 0.986
tsg101
Tumor susceptibility 101a.
    
 0.977
LOC100705126
Zgc:123278.
    
 0.977
chmp2a
Charged multivesicular body protein 2A.
    
 0.973
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.968
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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