STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100700846Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (370 aa)    
Predicted Functional Partners:
pln
Cardiac phospholamban.
    
 0.551
LOC100700877
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.534
LOC100693177
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.534
LOC100708259
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.534
tmem30a
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.534
Ccdc103
Coiled-coil domain-containing protein 103.
    
 0.448
ATP9A
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
0.448
Atp9b
Probable phospholipid-transporting ATPase IIB isoform X2.
    
0.448
LOC100707558
FXYD domain-containing ion transport regulator; Belongs to the FXYD family.
    
  0.424
atp1b2
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.
    
 0.420
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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