Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100709066BICD family like cargo adaptor 2. (427 aa)    
Predicted Functional Partners:
bicdl1
BICD family like cargo adaptor 1.
     
 0.924
LOC100700488
Si:ch211-235m3.5.
     
  0.916
LOC100704130
Zgc:162200.
      
 0.492
HOOK3
Hook microtubule tethering protein 3.
    
 0.439
I3J3C3_ORENI
Hook microtubule-tethering protein 1.
    
 0.439
rab12
RAB12, member RAS oncogene family.
    
 
 0.414
I3JR68_ORENI
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.412
LOC100693219
Bicaudal D homolog 2 (Drosophila).
      
 0.410
LOC100711213
Uncharacterized protein.
      
 0.410
RAB11FIP3
RAB11 family interacting protein 3.
      
 0.410
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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