Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSONIP00000006264Capicua transcriptional repressor a. (1718 aa)    
Predicted Functional Partners:
LOC100690947
Ataxin 1b.
    
 
 0.840
LOC102079948
Ataxin-1-like.
    
 
 0.840
atxn1
Ataxin 1/1L.
    
 
 0.840
atxn1l
Ataxin 1-like.
    
 
 0.738
rbm17
RNA binding motif protein 17.
      
 0.500
LOC102082809
Mitogen-activated protein kinase 7.
    
  0.494
LOC100697722
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
  0.494
mapk1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
  0.494
LOC100701083
Parvalbumin 6; Belongs to the parvalbumin family.
    
 
 0.400
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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