STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100703489GTPase, IMAP family member 8. (261 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.759
ccdc134
Si:dkey-167k11.5.
    
 
 0.681
LOC100692890
RAN binding protein 2.
    
 0.521
LOC102079697
AIG1-type G domain-containing protein.
  
     0.510
foxf1
Forkhead box F1.
    
 0.503
Trim37
Tripartite motif containing 37.
    
 
 0.496
LOC100698054
Uncharacterized protein.
    
 0.491
I3J5Q5_ORENI
RAS protein activator like 3.
      
 0.489
fhl2
Four and a half LIM domains 2b.
    
 0.481
I3KAU3_ORENI
Insulin-like growth factor 2b.
      
 0.480
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.