Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC100703489GTPase, IMAP family member 8. (261 aa)    
Predicted Functional Partners:
ccdc134
Si:dkey-167k11.5.
    
 
 0.733
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.652
Trim37
Tripartite motif containing 37.
    
 0.565
I3J5Q5_ORENI
RAS protein activator like 3.
      
 0.556
LOC100698054
Uncharacterized protein.
    
 0.521
LOC102079697
AIG1-type G domain-containing protein.
  
     0.510
foxf1
Forkhead box F1.
    
 0.472
LOC100692890
RAN binding protein 2.
    
 0.470
fhl2
Four and a half LIM domains 2b.
    
 0.463
LOC102076869
AIG1-type G domain-containing protein.
  
     0.460
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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