Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100704278Uncharacterized protein; Belongs to the peptidase C1 family. (346 aa)    
Predicted Functional Partners:
LOC100700357
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.668
ctsd
Cathepsin D; Belongs to the peptidase A1 family.
   
 0.667
lgmn
Legumain.
   
 
 0.622
ENSONIP00000052170
Cathepsin B.
  
0.594
ENSONIP00000068794
Cathepsin B.
  
0.594
LOC100707845
Cathepsin Ba; Belongs to the peptidase C1 family.
  
0.588
ctso
Cathepsin O; Belongs to the peptidase C1 family.
   
 0.580
LOC100705328
Baculoviral IAP repeat containing 2.
     
 0.570
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.549
rps14
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.549
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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