Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc43a3Uncharacterized protein. (527 aa)    
Predicted Functional Partners:
slc6a15
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.678
slc39a4
ZIP4_domain domain-containing protein.
      
 0.666
LOC100708533
Zgc:101785.
   
 0.603
slc35f2
Solute carrier family 35 member F2.
   
  
 0.465
Slc22a31
Solute carrier family 22 member 31.
     
 0.460
LOC100705166
Hcy-binding domain-containing protein; Involved in the regulation of homocysteine metabolism.
      
 0.452
arhgef18
Rho/rac guanine nucleotide exchange factor (GEF) 18b.
     
 0.452
LOC100694683
Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport. Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
   
  
 0.413
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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