Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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[Homology]
Score
I3JC11_ORENIPalmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (627 aa)    
Predicted Functional Partners:
LOC102076673
Golgin A7.
   
 0.813
GOLGA7
Golgin A7.
   
 0.813
GOLGA7B
Golgin A7 family, member Ba.
   
 0.799
LOC100706946
Golgin A7 family member B.
   
 0.799
LOC100690158
Claudin domain containing 1a.
    
   0.575
LOC100709264
Claudin domain containing 1.
    
   0.575
pot1
Protection of telomeres 1 homolog.
    
 0.473
LOC100694252
ATP-binding cassette, sub-family A (ABC1), member 1A.
     
  0.473
I3KQB3_ORENI
ATP-binding cassette, sub-family A (ABC1), member 4b.
     
  0.473
LOC100699821
ATP binding cassette subfamily A member 1.
     
  0.473
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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