Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
prkar1bProtein kinase, cAMP-dependent, regulatory, type I, beta. (391 aa)    
Predicted Functional Partners:
LOC100699977
Uncharacterized protein; Belongs to the protein kinase superfamily.
 
 
 0.973
I3KRQ1_ORENI
Protein kinase, cAMP-dependent, regulatory, type II, alpha, B.
  
  
0.940
LOC100690733
Protein kinase, cAMP-dependent, regulatory, type II, alpha A.
  
  
 
0.938
prkar2b
CAMP-dependent protein kinase type II-beta regulatory subunit.
  
  
 
0.937
LOC100700452
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
 
 
 0.923
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
 
 
 0.923
prkaca
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
   
 0.922
Prkx
Protein kinase X-linked; Belongs to the protein kinase superfamily.
 
 
 0.879
lipe
Lipase, hormone-sensitive b.
     
 0.869
LOC100708083
Lipase, hormone-sensitive a.
     
 0.869
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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