Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DNAAF5Dynein axonemal assembly factor 5. (855 aa)    
Predicted Functional Partners:
xpo6
Exportin 6.
    
 
 0.928
LOC100707731
Radial spoke head component 4A.
    
 
 0.742
dnai2
Dynein, axonemal, intermediate chain 2b.
    
 
 0.735
dnaaf4
Dynein axonemal assembly factor 4.
      
 0.722
Lrrc6
Leucine rich repeat containing 6.
      
 0.711
Ccdc103
Coiled-coil domain-containing protein 103.
      
 0.710
cfap300
Cilia and flagella associated protein 300.
    
 
 0.704
cfap298
Cilia and flagella associated protein 298.
      
 0.704
dnaaf3
Dynein, axonemal, assembly factor 3 like.
      
 0.701
zmynd10
Zinc finger, MYND-type containing 10.
      
 0.699
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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