Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC100708615Cholinergic receptor, nicotinic, beta 3b (neuronal). (486 aa)    
Predicted Functional Partners:
LYPD6
LY6/PLAUR domain containing 6.
    
 0.924
LOC100690921
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.818
LOC100691407
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
   
 0.803
LOC100703627
Cholinergic receptor, nicotinic, alpha 4b.
   
 0.803
LOC100696671
Cholinergic receptor, nicotinic, beta 4 (neuronal).
   
 0.675
LOC100700017
Cholinergic receptor, nicotinic, alpha 6.
   
 0.645
LOC100696615
Uncharacterized protein.
   
 0.645
ulk4
Unc-51 like kinase 4.
      
 0.626
chrnb2
Cholinergic receptor, nicotinic, beta 2.
   
 0.616
LOC100706970
Cholinergic receptor, nicotinic, alpha 3.
   
 0.616
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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