Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glis2GLIS family zinc finger 2b. (476 aa)    
Predicted Functional Partners:
vim
Vimentin like; Belongs to the intermediate filament family.
    
 
 0.744
LOC100699056
ARVCF delta catenin family member a.
    
 
 0.715
ctnna2
Catenin (cadherin-associated protein), alpha 2.
     
 0.642
ctnna1
Catenin (cadherin-associated protein), alpha 1.
     
 0.642
LOC100704787
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
     
 0.578
LOC100690424
Integrin, alpha 6b; Belongs to the integrin alpha chain family.
     
 0.578
hoxb9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
      
 0.572
LOC102079796
B-cell receptor CD22.
      
 0.553
LOC100706613
Mal, T cell differentiation protein.
      
 0.553
I3JV25_ORENI
Uncharacterized protein.
      
 0.553
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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