STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glis2GLIS family zinc finger 2b. (476 aa)    
Predicted Functional Partners:
LOC100699056
ARVCF delta catenin family member a.
    
 
 0.607
vim
Vimentin like; Belongs to the intermediate filament family.
    
 
 0.585
LOC100704787
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
     
 0.528
LOC100690424
Integrin, alpha 6b; Belongs to the integrin alpha chain family.
     
 0.528
itga6
Integrin, alpha 6a; Belongs to the integrin alpha chain family.
     
 0.526
I3JV25_ORENI
Uncharacterized protein.
     
 0.488
ENSONIP00000076946
Cadherin 26.
     
 0.488
LOC102079796
B-cell receptor CD22.
      
 0.487
LOC100706613
Mal, T cell differentiation protein.
      
 0.487
LOC100708039
Mal, T cell differentiation protein b.
      
 0.487
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.