Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3JCJ3_ORENITNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (232 aa)    
Predicted Functional Partners:
ENSONIP00000016286
annotation not available
    
 0.964
I3JR76_ORENI
Uncharacterized protein.
    
 0.953
LOC102082670
TNFR-Cys domain-containing protein.
    
 0.953
ENSONIP00000073708
Tumor necrosis factor receptor superfamily member 14.
    
 0.953
LOC102082760
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
     
  0.910
ENSONIP00000075436
annotation not available
     
  0.910
LOC109204105
Tumor necrosis factor receptor superfamily member 6B isoform X1.
    
 0.882
ENSONIP00000059106
annotation not available
    
 0.882
LOC100691514
Uncharacterized protein.
    
 0.882
LOC100710188
Uncharacterized protein.
    
 0.861
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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