Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100699759SRY-box transcription factor 9b. (503 aa)    
Predicted Functional Partners:
runx2
Runt-related transcription factor.
   
 0.802
LOC100534555
Doublesex and mab-3 related transcription factor 1.
    
 0.787
gata4
GATA binding protein 4.
    
 0.687
LOC100691239
Runt-related transcription factor.
   
 0.678
runx3
Runt-related transcription factor.
   
 0.678
egr2
Early growth response 2b.
    
 0.650
sf-1
SF-1/Ad4BP.
    
 0.645
Rspo1
R-spondin 1.
    
 
 0.643
LOC100696675
Paired box 3a.
   
 0.635
Gbx2
Gastrulation brain homeobox 2.
    
 0.629
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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