Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100709410Beta-galactosidase. (640 aa)    
Predicted Functional Partners:
gla
Alpha-galactosidase.
  
 
 0.712
neu1
Neuraminidase 1.
  
 0.703
LOC100709447
Glucosidase, beta, acid 3 (gene/pseudogene); Belongs to the glycosyl hydrolase 1 family.
  
 
 0.695
naga
Alpha-galactosidase.
  
 
 0.667
rbbp5
Retinoblastoma binding protein 5.
    
 0.614
LOC100708292
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
  
 0.613
LOC100699240
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
  
 0.613
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.601
mars2
Methionyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
   0.594
ctsa
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.587
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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