Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3JCV6_ORENIBAH domain and coiled-coil containing 1a. (1896 aa)    
Predicted Functional Partners:
LOC100694309
SIN3-HDAC complex associated factor.
    
 
 0.900
sap30l
Sap30-like.
    
 
 0.758
ENSONIP00000078435
SIN3-HDAC complex-associated factor.
    
 
 0.727
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.652
Hdgfl2
Hepatoma-derived growth factor-related protein 2.
    
 0.631
sin3a
SIN3 transcription regulator family member Aa.
   
 0.628
sin3b
SIN3 transcription regulator family member B.
   
 0.628
LOC100694434
SIN3 transcription regulator family member Ab.
   
 0.628
I3K8L8_ORENI
Activator of transcription and developmental regulator AUTS2 a.
   
 0.626
dnpep
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
    
 
 0.625
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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