STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fermt3Fermitin family member 3b. (646 aa)    
Predicted Functional Partners:
fblim1
Filamin binding LIM protein 1.
    
 0.744
LOC100701917
Uncharacterized protein.
   
 
 0.683
ILK
Integrin linked kinase.
   
 
 0.683
Itgb8
Integrin beta; Belongs to the integrin beta chain family.
   
 0.665
parvg
Parvin, gamma.
   
 
 0.613
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.556
itgb4
Integrin beta.
   
 0.543
apbb1ip
Amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein.
   
  
 0.533
APBB1IP
Uncharacterized protein.
   
  
 0.533
PLEKHG1
Pleckstrin homology and RhoGEF domain containing G1.
    
 0.493
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.