STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100695319Uncharacterized protein. (505 aa)    
Predicted Functional Partners:
sav1
Salvador family WW domain containing protein 1.
    
 0.966
LOC100703188
MOB kinase activator 1A.
   
 0.960
LOC100695417
Caspase 3; Belongs to the peptidase C14A family.
   
  0.942
ENSONIP00000063243
Caspase 3.
   
  0.942
I3JV59_ORENI
Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
   
  0.942
ENSONIP00000068079
Cysteine-rich protein 1.
    
 0.927
foxo4
Forkhead box O4.
    
 0.920
foxo3
Forkhead box O3b.
    
 0.920
LOC100706939
Forkhead box O1 a.
    
 0.920
LOC100706370
Fork-head domain-containing protein.
    
 0.920
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.