STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trmt112tRNA methyltransferase subunit 11-2. (123 aa)    
Predicted Functional Partners:
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
    
 0.999
bud23
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
 0.998
trmt11
tRNA methyltransferase 11 homolog.
   
 0.983
hemk1
HemK methyltransferase family member 1.
    
 0.969
Trmt9b
tRNA methyltransferase 9B.
   
 0.968
trmt12
tRNA methyltransferase 12 homolog.
   
 
 0.965
mettl5
Methyltransferase like 5.
    
 
 0.948
I3J1F4_ORENI
Methyltranfer_dom domain-containing protein.
   
 0.932
LOC100697910
Methyltransferase like 27.
   
 0.932
ENSONIP00000066186
annotation not available
   
 0.932
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.