STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JDF3_ORENIIQ motif and ubiquitin domain containing. (653 aa)    
Predicted Functional Partners:
I3KAM4_ORENI
Armadillo repeat containing 3.
   
 
 0.760
I3J1N4_ORENI
EF-hand calcium binding domain 1.
   
 0.733
armc4
Armadillo repeat containing 4.
  
 
 0.715
Lg12h9orf116
UPF0691 protein C9orf116 homolog.
      
 0.688
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.636
GAS8
Growth arrest specific 8.
   
 
 0.591
LOC102079040
Coiled-coil domain containing 96.
   
 
 0.586
Iqcd
Uncharacterized protein.
   
  
 0.578
rsph3
Radial spoke head 3.
   
 
 0.549
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.527
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.