Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc33a1Solute carrier family 33 member 1. (541 aa)    
Predicted Functional Partners:
b4galnt1
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.926
LOC100705425
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.926
st8sia1
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
     
  0.916
st8sia5
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
     
  0.916
ENSONIP00000008099
annotation not available
     
  0.909
ppcs
Phosphopantothenoylcysteine synthetase.
 
    
 0.808
slc23a1
Solute carrier family 23 member 1.
   
  
 0.738
slc30a5
Solute carrier family 30 member 5.
   
  
 0.713
nipa1
NIPA magnesium transporter 1.
   
  
 0.683
LOC100706374
DnaJ heat shock protein family (Hsp40) member B9a.
   
 
 0.672
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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