Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Pcmt1Protein-L-isoaspartate O-methyltransferase. (270 aa)    
Predicted Functional Partners:
aimp2
Aminoacyl tRNA synthetase complex interacting multifunctional protein 2.
    
   0.763
I3K9K7_ORENI
Deoxyribose-phosphate aldolase (putative).
    
   0.760
tmem183a
Transmembrane protein 183A.
      
 0.725
SRBD1
S1 RNA binding domain 1.
      
 0.706
borcs5
BLOC-1 related complex subunit 5.
      
 0.699
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
     
 0.687
pfdn4
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
   
  
 0.684
zc3h15
Zinc finger CCCH-type containing 15.
      
 0.678
hsf2bp
Heat shock transcription factor 2 binding protein.
      
 0.672
ttc7a
Tetratricopeptide repeat domain 7A.
      
 0.668
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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