Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cenpnCentromere protein N. (348 aa)    
Predicted Functional Partners:
cenpm
Proliferation associated nuclear element.
   
 0.999
cenpk
Centromere protein K.
   
 0.998
LOC100711837
Uncharacterized protein.
   
 0.997
cenpi
Centromere protein I.
   
 0.996
cenpp
Centromere protein P.
   
 0.993
I3IW58_ORENI
Uncharacterized protein.
   
 
 0.931
ENSONIP00000039306
Centromere protein W.
   
 
 0.931
LOC100709661
Baculoviral IAP repeat containing 5a.
   
  
 0.928
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 
 0.911
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 
 0.903
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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