STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DnerDelta/notch-like EGF repeat containing. (726 aa)    
Predicted Functional Partners:
iglon5
IgLON family member 5.
   
 0.522
I3JHC2_ORENI
Integrin beta; Belongs to the integrin beta chain family.
    
 0.503
Itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.503
itgb4
Integrin beta.
    
 0.503
LOC100699105
Integrin beta; Belongs to the integrin beta chain family.
    
 0.503
neo1
Neogenin 1b.
   
  
 0.490
mettl9
Methyltransferase like 9.
      
 0.474
LGI2
Leucine-rich repeat LGI family, member 2b.
   
  
 0.465
LOC100692890
RAN binding protein 2.
    
 0.464
mettl8
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.459
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.