Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rnf7Ring finger protein 7. (114 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog a; Belongs to the SKP1 family.
   
 0.998
I3JU14_ORENI
Elongin B.
   
 0.993
elob
Ubiquitin-like domain-containing protein.
   
 0.993
LOC100703753
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.993
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.993
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.992
Ube2c
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.982
cul2
Cullin 2; Belongs to the cullin family.
    
 0.967
ubxn7
UBX domain protein 7.
    
 0.961
asb6
Ankyrin repeat and SOCS box containing 6.
    
 0.959
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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