Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
calml4Calmodulin-like 4a. (153 aa)    
Predicted Functional Partners:
LOC100701793
Calmodulin-like 4b.
  
  
 
0.959
phkg1
Phosphorylase kinase, gamma 1a (muscle).
    
 0.947
phkg2
Phosphorylase kinase, gamma 2 (testis); Belongs to the protein kinase superfamily.
    
 0.939
LOC100695100
Calcium/calmodulin dependent protein kinase II beta.
    
 0.939
pygl
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
   
 0.938
Camk4
Si:ch73-60h1.1; Belongs to the protein kinase superfamily.
    
 0.938
LOC100697276
Serine/threonine-protein phosphatase.
    
 0.936
PPP3CA
Serine/threonine-protein phosphatase.
    
 0.936
LOC100705041
Protein kinase domain-containing protein.
    
 0.935
Itpr3
Inositol 1,4,5-trisphosphate receptor, type 3.
    
 0.935
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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