STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTCFCCCTC-binding factor. (335 aa)    
Predicted Functional Partners:
ENSONIP00000047103
MFS-type transporter SLC18B1.
      
 0.725
I3IWA1_ORENI
Solute carrier family 18 member B1.
      
 0.725
LOC100710134
RAD21 cohesin complex component a.
   
 0.710
LOC100705420
RAD21 cohesin complex component b.
   
 0.710
LOC100698455
RAD21 cohesin complex component like 1.
   
 0.710
LOC100692362
Si:ch211-269e2.1.
   
 
 0.604
LOC100703806
Stromal antigen 2b.
   
 
 0.604
I3J9E8_ORENI
Stromal antigen 2a.
   
 
 0.604
ENSONIP00000055510
annotation not available
   
 
 0.604
stag1
Stromal antigen 1a.
   
 
 0.604
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.