STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpeb1Cytoplasmic polyadenylation element binding protein 1b. (577 aa)    
Predicted Functional Partners:
LOC100694808
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.933
LOC100692470
Cyclin B2; Belongs to the cyclin family.
   
 
 0.925
cdk1
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.915
tent2
Terminal nucleotidyltransferase 2.
   
 
 0.852
sympk
Symplekin.
    
 
 0.842
I3JVP4_ORENI
Uncharacterized protein.
   
  
 0.727
LOC100704180
Poly(A) polymerase gamma.
    
 
 0.719
LOC100705797
RRM domain-containing protein.
   
 
 0.676
ngdn
Neuroguidin, EIF4E binding protein.
      
 0.641
parn
Poly(A)-specific ribonuclease (deadenylation nuclease).
    
 
 0.637
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.