Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RFX7Regulatory factor X7. (1409 aa)    
Predicted Functional Partners:
rfxap
Regulatory factor X-associated protein.
    
 0.816
rfxank
Regulatory factor X-associated ankyrin-containing protein.
    
 0.789
Chek2
Checkpoint kinase 2.
   
 0.656
atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.607
ciita
MHC class II transactivator isoform X1.
    
 0.562
btaf1
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.
    
   0.545
ss18
SS18 subunit of BAF chromatin remodeling complex.
      
 0.492
ankra2
Ankyrin repeat, family A (RFXANK-like), 2.
   
 0.474
ttc25
Tetratricopeptide repeat domain 25.
    
 
 0.443
arl13b
ADP-ribosylation factor-like 13b.
      
 0.438
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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