STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100710390Myocardial zonula adherens protein. (673 aa)    
Predicted Functional Partners:
I3JH55_ORENI
Troponin T type 1 (skeletal, slow).
   
 0.609
LOC100705731
Uncharacterized protein.
   
 0.609
I3JPV4_ORENI
Uncharacterized protein.
   
 0.609
LOC100707421
Troponin T type 3a (skeletal, fast).
   
 0.609
LOC100694953
Troponin T type 2a (cardiac).
   
 0.609
gatd1
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.609
I3KJ19_ORENI
Uncharacterized protein.
   
 0.609
I3KVX2_ORENI
Uncharacterized protein.
   
 0.609
I3KY05_ORENI
Troponin T2c, cardiac.
   
 0.609
ENSONIP00000056018
Troponin T type 2b (cardiac).
   
 0.609
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.