Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cfap70Cilia and flagella associated protein 70. (1165 aa)    
Predicted Functional Partners:
Prkn
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.904
I3K1V0_ORENI
Trafficking protein, kinesin binding 2.
    
 0.830
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
   
 0.814
Myo19
Myosin XIX; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.808
wdr90
WD repeat domain 90.
 
 
 0.805
I3J608_ORENI
NBR1 autophagy cargo receptor b.
     
 0.793
nbr1
NBR1 autophagy cargo receptor a.
     
 0.793
cfap58
Cilia and flagella associated protein 58.
   
 
 0.781
usp30
Ubiquitin carboxyl-terminal hydrolase.
     
 0.748
I3KE72_ORENI
Uncharacterized protein.
    
 0.741
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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