STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nr1h3Nuclear receptor subfamily 1, group H, member 3. (464 aa)    
Predicted Functional Partners:
Rxra
Retinoid X receptor, alpha a.
   
0.929
I3J408_ORENI
Retinoid x receptor, beta b.
   
0.921
RXRB
Retinoid X receptor beta.
   
0.921
LOC100706800
Uncharacterized protein.
   
0.921
ncoa2
Nuclear receptor coactivator 2.
    
 0.848
LOC100698057
Nuclear receptor coactivator.
    
 0.848
ncoa1
Nuclear receptor coactivator 1.
    
 0.848
NCOA3
Nuclear receptor coactivator.
    
 0.848
I3KWU7_ORENI
Nuclear receptor coactivator 3.
    
 0.848
ncor2
Nuclear receptor corepressor 2.
    
 0.840
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.