STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dlec1DLEC1 cilia and flagella associated protein. (1706 aa)    
Predicted Functional Partners:
rsph14
Uncharacterized protein.
    
 
 0.644
Lrrc23
Leucine-rich repeat-containing protein 23 isoform X2.
   
 0.627
cfap161
Cilia- and flagella-associated protein 161.
   
 0.625
ccdc146
Coiled-coil domain containing 146.
    
 0.597
LOC100692025
Leucine rich repeat containing 34.
    
 0.594
spata18
Spermatogenesis associated 18.
      
 0.577
tsnaxip1
Translin-associated factor X-interacting protein 1 isoform X1.
   
 0.559
CEP128
Centrosomal protein 128.
    
 0.489
ENSONIP00000038349
RING finger protein 223.
   
 0.436
faap24
FA core complex associated protein 24.
      
 0.429
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.