Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ttc17Tetratricopeptide repeat domain 17. (1208 aa)    
Predicted Functional Partners:
gphb5
Glycoprotein hormone subunit beta 5.
      
 0.900
Api5
Apoptosis inhibitor 5.
 
    
 0.845
ENSONIP00000032846
BLOC-1 related complex subunit 7.
      
 0.738
vsig10
Uncharacterized protein.
      
 0.701
ubfd1
Ubiquitin family domain containing 1.
      
 0.696
LOC100691524
Polycystic kidney disease 1 like 2a.
   
  
 0.640
ENSONIP00000066542
annotation not available
   
  
 0.640
kif3b
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.634
kif3c
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.634
Tmem131
Transmembrane protein 131.
      
 0.633
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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