Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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Textmining
[Homology]
Score
rbm33RNA binding motif protein 33a. (1257 aa)    
Predicted Functional Partners:
thoc7
THO complex 7.
    
 
 0.789
igbp1
Immunoglobulin (CD79A) binding protein 1.
   
 
 0.774
ncbp3
Nuclear cap binding subunit 3.
    
   0.756
MTCL1
Microtubule crosslinking factor 1.
      
 0.756
thoc1
THO complex 1.
    
 
 0.752
lhfpl2
LHFPL tetraspan subfamily member 2a.
      
 0.751
Pcf11
PCF11 cleavage and polyadenylation factor subunit.
   
 
 0.723
cpsf1
Cleavage and polyadenylation specific factor 1.
      
 0.709
nom1
Nucleolar protein with MIF4G domain 1.
      
 0.699
samd11
Sterile alpha motif domain containing 11.
      
 0.698
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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