STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100690310Protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative). (435 aa)    
Predicted Functional Partners:
map2k4
Mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily.
   
 
 0.920
MAP2K6
Mitogen-activated protein kinase kinase 6.
    
 0.916
ppm1a
Protein phosphatase, Mg2+/Mn2+ dependent, 1Aa.
  
  
 
0.902
LOC100703480
Protein phosphatase, Mg2+/Mn2+ dependent, 1Nb (putative).
  
  
 
0.901
arih1
RBR-type E3 ubiquitin transferase.
   
 
 0.540
prkaa1
Non-specific serine/threonine protein kinase.
   
 0.509
prkaa2
Non-specific serine/threonine protein kinase.
   
 0.509
mtfmt
Mitochondrial methionyl-tRNA formyltransferase.
  
   0.505
ENSONIP00000047919
Ubiquitin B.
   
 0.495
LOC100708998
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.477
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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