Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
lpgat1Lysophosphatidylglycerol acyltransferase 1. (372 aa)    
Predicted Functional Partners:
I3J3Q8_ORENI
Lysophosphatidylcholine acyltransferase 2.
     
 0.951
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
     
 0.945
LOC100705409
Lysophosphatidylcholine acyltransferase 1.
     
 0.942
Crls1
Cardiolipin synthase (CMP-forming).
  
 
 0.931
lclat1
Lysocardiolipin acyltransferase 1.
     
 0.926
LOC100693391
Lysophosphatidylcholine acyltransferase 4.
     
 0.924
chpt1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.797
commd1
Copper metabolism (Murr1) domain containing 1.
     
  0.795
I3KH87_ORENI
Glycerol-3-phosphate acyltransferase 1, mitochondrial.
  
 
 0.784
agpat3
1-acylglycerol-3-phosphate O-acyltransferase 3.
     
 0.725
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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