STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rd3Retinal degeneration 3, GUCY2D regulator. (210 aa)    
Predicted Functional Partners:
ENSONIP00000076950
Spermatogenesis associated 7.
      
 0.588
LOC100708748
RPGR interacting protein 1.
      
 0.576
LOC102079881
Lebercilin LCA5.
      
 0.573
I3J3Q0_ORENI
SUN domain containing ossification factor.
      
 0.542
LOC100693460
SUN domain-containing protein.
      
 0.542
eif2b1
Eukaryotic translation initiation factor 2B, subunit 1 alpha; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.522
nek2
NIMA-related kinase 2.
      
 0.510
fgf5
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.506
cep290
Centrosomal protein 290.
      
 0.495
I3JVB1_ORENI
Lecithin retinol acyltransferase a.
      
 0.493
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.