Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3JFI3_ORENIZgc:153215. (513 aa)    
Predicted Functional Partners:
aadat
Aminoadipate aminotransferase.
     
  0.603
LOC100705311
Aspartate aminotransferase.
     
  0.603
ddc
Dopa decarboxylase.
     
  0.478
hdc
Histidine decarboxylase.
     
  0.478
etf1
Eukaryotic translation termination factor 1b.
   
 
 0.461
ylpm1
YLP motif containing 1.
   
  
 0.434
pwwp2b
PWWP domain containing 2B.
      
 0.410
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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