Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem67Transmembrane protein 67. (984 aa)    
Predicted Functional Partners:
mks1
MKS transition zone complex subunit 1.
     
 0.997
ENSONIP00000000898
Abelson helper integration site 1.
     
 0.995
b9d1
B9 protein domain 1.
     
 0.992
LOC100700830
Transmembrane protein 216.
   
 
 0.990
Cc2d2a
Coiled-coil and C2 domain containing 2A.
   
 
 0.988
b9d2
B9 domain containing 2.
     
 0.959
tctn1
DUF1619 domain-containing protein.
     
 0.942
nphp1
Nephrocystin-1 isoform X2.
   
  
 0.918
rpgrip1l
RPGRIP1 like.
   
  
 0.916
cep290
Centrosomal protein 290.
      
 0.903
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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