Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
virmaVir like m6A methyltransferase associated. (1895 aa)    
Predicted Functional Partners:
zc3h13
Zinc finger CCCH-type containing 13.
   
 
 0.997
wtap
WT1 associated protein.
    
 
 0.996
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
    
 0.982
I3K1L6_ORENI
Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase.
    
 0.982
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
    
 0.971
rbm15
RNA binding motif protein 15.
   
 
 0.962
alyref
Aly/REF export factor.
    
 
 0.942
Thoc2
THO complex 2.
   
 
 0.873
I3KZK8_ORENI
RNA binding motif protein 15B.
   
 
 0.859
LOC100709252
RRM domain-containing protein.
    
 
 0.812
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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