Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100710732FAST kinase domains 3. (659 aa)    
Predicted Functional Partners:
fastkd1
FAST kinase domains 1.
   
 
 0.834
stk16
Serine/threonine kinase 16.
    
   0.762
fastkd2
FAST kinase domains 2.
   
 
 0.752
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
   
  
 0.714
Mrps31
Mitochondrial ribosomal protein S31.
    
 
 0.701
mrps22
Mitochondrial ribosomal protein S22.
   
 
 0.651
etfa
Electron transfer flavoprotein subunit alpha.
   
 0.629
dnajc12
DnaJ (Hsp40) homolog, subfamily C, member 12.
      
 0.623
LOC100693549
Cardiomyopathy associated 5.
      
 0.621
rdm1
RRM domain-containing protein.
      
 0.621
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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